StrainDesign Logo

Contents:

  • Solvers
  • Network Analysis
  • Plotting the flux space
  • Computational strain design: Growth-coupled production (GCP)
  • Minimal Cut Sets (MCS)
  • Multi-level strain optimization approaches
  • Standalone network compression
  • CNApy interface
  • StrainDesign API
  • Legacy Methods
  • StrainDesign Developer’s Guide
StrainDesign
  • Overview: module code

All modules for which code is available

  • straindesign
    • straindesign.compression
    • straindesign.compute_strain_designs
    • straindesign.cplex_interface
    • straindesign.efmtool_cmp_interface
    • straindesign.glpk_interface
    • straindesign.gurobi_interface
    • straindesign.indicatorConstraints
    • straindesign.lptools
    • straindesign.networktools
    • straindesign.parse_constr
    • straindesign.pool
    • straindesign.scip_interface
    • straindesign.solver_interface
    • straindesign.speedy_fva
    • straindesign.strainDesignMILP
    • straindesign.strainDesignModule
    • straindesign.strainDesignProblem
    • straindesign.strainDesignSolutions

© Copyright 2023, Philipp Schneider.

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